Swapping color themes for the checkbox component is easy within the color tokens. There are 10 tokens for each color in the
Chakra palette. Each color is numbered: the higher the value – the darker is color. Overall, Chakra's colors are well-set and good to go with, taking off the headache to compound a palette for your next app UI.
To calibrate a component and prepare it for the themification you have to set proper color token values for each element the checkbox consists of an icon, text caption; hover, active, and other states. And this requires UI design skills and precise attention to UI details.
The image above shows an example of tokens specifications. After, by toggling color names (e.g Green→Blue→Purple) but keeping values you can easily recolor a checkbox in Chakra UI.
Why change checkbox colors, in general? In many cases you don't need to tune it deeply, however, you can't avoid using red for warning states, yellow for caution, and green for success. In order to highlight or diversify blocks, complex components, or even full app sections, you're free to use wisely Grey, Purple, Cyan, or other colors.